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  5. MA_254868g0010

MA_254868g0010 (EMB33, SUS2, EMB177, EMB14)


Aliases : EMB33, SUS2, EMB177, EMB14

Description : Pre-mRNA-processing-splicing factor 8B OS=Arabidopsis thaliana (sp|q9t0i6|prp8b_arath : 107.0)


Gene families : OG0003463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003463_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_254868g0010

Target Alias Description ECC score Gene Family Method Actions
Ala_g15277 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.04 OrthoFinder output from all 47 species
Als_g29416 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.02 OrthoFinder output from all 47 species
Aop_g13684 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.03 OrthoFinder output from all 47 species
Ceric.07G006500.1 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.02 OrthoFinder output from all 47 species
Dcu_g02064 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.04 OrthoFinder output from all 47 species
LOC_Os06g07080.1 EMB33, SUS2,... protein factor PRPF8/SUS2 of U5 small nuclear... 0.02 OrthoFinder output from all 47 species
Len_g05452 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.05 OrthoFinder output from all 47 species
Len_g31288 EMB33, SUS2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44858 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.05 OrthoFinder output from all 47 species
Lfl_g02476 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.03 OrthoFinder output from all 47 species
Msp_g13516 EMB33, SUS2,... protein factor *(PRPF8/SUS2) of MAC... 0.02 OrthoFinder output from all 47 species
Smo173603 EMB33, SUS2,... RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Zm00001e036397_P001 EMB33, SUS2,... protein factor PRPF8/SUS2 of U5 small nuclear... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!