Description : Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana (sp|q9fpt1|ubp12_arath : 95.9)
Gene families : OG0002960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002960_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_24634g0010 | |
Cluster | HCCA: Cluster_241 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G25320 | No alias | TRAF-like family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g107387 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g35642 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g18903 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Cba_g23168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G028800.1 | Ceric.02G028800 | not classified & original description: pacid=50585664... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g27503 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g12067 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01035878001 | No alias | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
Lfl_g05749 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g12534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp8g09710.1 | No alias | MATH domain and coiled-coil domain-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g24466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0159.g023847 | No alias | not classified & original description: CDS=1-5244 | 0.04 | OrthoFinder output from all 47 species | |
Smo173767 | No alias | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g017970.4.1 | Solyc06g017970 | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g37203 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e022965_P001 | Zm00001e022965 | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No external refs found! |