LOC_Os06g47590 (Os06g0691100)


Aliases : Os06g0691100

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g47590
Cluster HCCA cluster: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.02 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.02 Gene family
AT2G38340 DREB19 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.04 Gene family
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.02 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.05 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.03 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01008649001 No alias No description available 0.02 Gene family
GSVIVT01009007001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01013917001 No alias No description available 0.02 Gene family
GSVIVT01013918001 No alias No description available 0.02 Gene family
GSVIVT01013931001 No alias No description available 0.02 Gene family
GSVIVT01014291001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01018270001 No alias No description available 0.02 Gene family
GSVIVT01018271001 No alias No description available 0.03 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01021098001 No alias No description available 0.03 Gene family
GSVIVT01021146001 No alias No description available 0.02 Gene family
GSVIVT01028314001 No alias No description available 0.03 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01035852001 No alias No description available 0.02 Gene family
GSVIVT01035911001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.03 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os05g49700 Os05g0572000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.02 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.02 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.03 Gene family
MA_132427g0010 No alias No description available 0.03 Gene family
MA_16778g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_2407076g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_364562g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_4182g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo73155 PACid_15404551 No description available 0.02 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.02 Gene family
Solyc02g067020.1.1 Solyc02g067020.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.05 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.03 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.03 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.03 Gene family
Solyc04g078640.2.1 Solyc04g078640.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.03 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.02 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.02 Gene family
Solyc07g049490.2.1 Solyc07g049490.2 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Solyc08g007230.2.1 Solyc08g007230.2 No description available 0.02 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.03 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.02 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.02 Gene family
Solyc11g006050.1.1 Solyc11g006050.1 No description available 0.02 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.02 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.06 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d002079 GRMZM2G174917 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.05 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
Zm00001d015639 GRMZM2G079653 No description available 0.05 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.03 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d018191 GRMZM2G021369 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.02 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.03 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.04 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.07 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.04 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d027929 No alias No description available 0.04 Gene family
Zm00001d029884 GRMZM5G806839 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d036536 GRMZM2G175543 No description available 0.02 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.02 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.03 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.03 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.07 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 16 65
No external refs found!