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  5. MA_2211g0010

MA_2211g0010


Description : Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana (sp|q9sw33|tl1y_arath : 90.5)


Gene families : OG0007188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_2211g0010
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT4G24930 No alias thylakoid lumenal 17.9 kDa protein, chloroplast 0.04 OrthoFinder output from all 47 species
Aob_g00638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0280.g062278 No alias not classified & original description: CDS=1-762 0.04 OrthoFinder output from all 47 species
Ceric.09G053800.1 Ceric.09G053800 not classified & original description: pacid=50586848... 0.03 OrthoFinder output from all 47 species
Lfl_g40777 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g019660.4.1 Solyc03g019660 Thylakoid lumenal 17.9 kDa protein, chloroplastic... 0.04 OrthoFinder output from all 47 species
Tin_g31440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!