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  5. MA_22084g0010

MA_22084g0010 (MEE66)


Aliases : MEE66

Description : F-box protein At2g02240 OS=Arabidopsis thaliana (sp|q3e6p4|fb95_arath : 185.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_22084g0010
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.03 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.03 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.03 OrthoFinder output from all 47 species
Ala_g04871 AtPP2-B7, PP2-B7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064522 No alias not classified & original description: CDS=100-843 0.02 OrthoFinder output from all 47 species
Dcu_g02337 AtPP2-B8, PP2-B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003900001 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g56810.1 AtPP2-B2,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g44753 AtPP2-B1, PP2-B1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g017960.2.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Zm00001e040260_P002 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041427_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 46
IPR025886 PP2-like 97 282
No external refs found!