LOC_Os06g46410 (Os06g0677800)


Aliases : Os06g0677800

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167. auxin response factor 6 (ARF6)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g46410
Cluster HCCA cluster: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019566001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
GSVIVT01032251001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os08g40900 Os08g0520500,... 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os11g32110 Os11g0523800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.07 Gene family
LOC_Os12g29520 Os12g0479400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
MA_134742g0020 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
MA_40335g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_67394g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc07g016180.3.1 Solyc07g016180.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Solyc11g069500.2.1 Solyc11g069500.2 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
Zm00001d001879 GRMZM2G078274 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d016838 GRMZM2G702026 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d026590 GRMZM2G475882 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d043431 GRMZM2G056120 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 260 343
IPR033389 AUX/IAA_dom 783 871
IPR003340 B3_DNA-bd 134 235
No external refs found!