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  5. MA_214577g0010

MA_214577g0010 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : ABC transporter G family member 40 OS=Arabidopsis thaliana (sp|q9m9e1|ab40g_arath : 150.0)


Gene families : OG0002595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002595_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_214577g0010
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00193610 PDR11, ATPDR11,... ABC transporter G family member 43 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Als_g51599 PDR1, ATPDR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33401 PDR6, ATPDR6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g43789 PDR6, ATPDR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G068400.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01017186001 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Ore_g01529 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14475 PDR1, ATPDR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38423 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61713 PDR6, ATPDR6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52149 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 81 133
No external refs found!