MA_21090g0010 (SNL2)

Aliases : SNL2

Description : Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana (sp|q9lfq3|snl2_arath : 232.0)

Gene families : OG0000547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_21090g0010

Target	Alias	Description	ECC score	Gene Family Method
AT1G24220	No alias	paired amphipathic helix repeat-containing protein	0.03	OrthoFinder output from all 47 species
AT1G27250	No alias	Paired amphipathic helix (PAH2) superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G15020	SNL2	SIN3-like 2	0.03	OrthoFinder output from all 47 species
Ceric.31G072300.1	SNL4, Ceric.31G072300	component *(SNL) of histone deacetylase machineries &...	0.02	OrthoFinder output from all 47 species
Mp2g12120.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Sam_g14557	No alias	component *(SNL) of histone deacetylase machineries &...	0.02	OrthoFinder output from all 47 species
Sam_g25571	No alias	component *(SNL) of histone deacetylase machineries &...	0.02	OrthoFinder output from all 47 species
Solyc02g067570.3.1	SNL2, Solyc02g067570	component SNL of histone deacetylase machineries	0.02	OrthoFinder output from all 47 species
Spa_g56389	SNL2	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0051260	protein homooligomerization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003822	PAH	58	102
IPR003822	PAH	144	188

External Links

No external refs found!