MA_207139g0010 (PBF1)

Aliases : PBF1

Description : component beta type-6 of 26S proteasome

Gene families : OG0004409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004409_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_207139g0010

Target	Alias	Description	ECC score	Gene Family Method
Adi_g015227	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Aev_g01998	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Als_g05819	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Aop_g00288	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Ehy_g28912	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
LOC_Os09g32800.1	PBF1, LOC_Os09g32800	component beta type-6 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Pp3c16_16960V3.1	PBF1, Pp3c16_16960	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.02	OrthoFinder output from all 47 species
Smo94273	PBF1	Protein degradation.26S proteasome.20S core...	0.02	OrthoFinder output from all 47 species
Spa_g13091	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Spa_g16539	PBF1	beta-type-6 component *(PBF) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	1	68

External Links

No external refs found!