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  5. LOC_Os01g12880.1

LOC_Os01g12880.1


Description : TOM endomembrane trafficking associated protein


Gene families : OG_01_0000369 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000369_tree ,
OG_02_0000606 (LandPlants) Phylogenetic Tree(s): OG_02_0000606_tree ,
OG_03_0001299 (SeedPlants) Phylogenetic Tree(s): OG_03_0001299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12880.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00032430 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 Archaeplastida
AT1G21380 No alias Target of Myb protein 1 0.03 Archaeplastida
AT1G76970 No alias Target of Myb protein 1 0.02 Archaeplastida
LOC_Os05g39760.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
MA_18253g0010 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Mp5g05840.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Pp3c20_7060V3.1 No alias ENTH/VHS/GAT family protein 0.03 Archaeplastida
Pp3c23_19630V3.1 No alias ENTH/VHS/GAT family protein 0.02 Archaeplastida
Smo176673 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
Smo67275 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
Solyc03g097070.3.1 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Solyc08g068370.3.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Solyc10g044750.3.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e016401_P001 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Zm00001e021369_P002 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Zm00001e026110_P002 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
AT1G21380 No alias Target of Myb protein 1 0.02 LandPlants
GSVIVT01030233001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 LandPlants
GSVIVT01035657001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 LandPlants
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.03 LandPlants
Pp3c20_7060V3.1 No alias ENTH/VHS/GAT family protein 0.02 LandPlants
Smo176673 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 LandPlants
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.03 LandPlants
Solyc08g068370.3.1 No alias TOM endomembrane trafficking associated protein 0.03 LandPlants
Zm00001e016401_P001 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
Zm00001e021369_P002 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
Zm00001e026110_P002 No alias TOM endomembrane trafficking associated protein 0.03 LandPlants
Zm00001e031902_P001 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
AMTR_s00031p00234160 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.01 SeedPlants
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants
Solyc08g068370.3.1 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants
Zm00001e016401_P001 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants
Zm00001e021369_P002 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants
Zm00001e026110_P002 No alias TOM endomembrane trafficking associated protein 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004152 GAT_dom 188 262
IPR002014 VHS_dom 5 126
No external refs found!