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  5. MA_20587g0010

MA_20587g0010 (ERD2B)


Aliases : ERD2B

Description : ERD2 COPI trafficking K/HDEL-signature receptor


Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_20587g0010
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT3G25040 ERD2B endoplasmic reticulum retention defective 2B 0.05 OrthoFinder output from all 47 species
Ala_g07087 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.05 OrthoFinder output from all 47 species
Als_g46718 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Aob_g03824 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Ceric.08G005400.1 ERD2B, Ceric.08G005400 COPI trafficking K/HDEL-signature cargo receptor &... 0.05 OrthoFinder output from all 47 species
Cre01.g051400 ERD2B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dcu_g00909 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.07 OrthoFinder output from all 47 species
Dde_g50719 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
LOC_Os04g30800.2 ERD2B, LOC_Os04g30800 ERD2 COPI trafficking K/HDEL-signature receptor 0.04 OrthoFinder output from all 47 species
Ppi_g05082 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Smo75833 ERD2B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Solyc09g091900.4.1 ERD2B, Solyc09g091900 ERD2 COPI trafficking K/HDEL-signature receptor 0.05 OrthoFinder output from all 47 species
Spa_g25735 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Zm00001e032183_P001 ERD2, ATERD2,... ERD2 COPI trafficking K/HDEL-signature receptor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA Interproscan
MF GO:0046923 ER retention sequence binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 171
No external refs found!