LOC_Os01g12810.3

Description : Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana (sp|q8s9d1|pp395_arath : 476.0)

Gene families : OG_01_0009354 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009354_tree ,
OG_02_0007114 (LandPlants) Phylogenetic Tree(s): OG_02_0007114_tree ,
OG_03_0006861 (SeedPlants) Phylogenetic Tree(s): OG_03_0006861_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g12810.3
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01015378001	No alias	Pentatricopeptide repeat-containing protein At5g21222...	0.06	Archaeplastida
Smo21211	No alias	Pentatricopeptide repeat-containing protein At5g21222...	0.03	Archaeplastida
Solyc07g032380.4.1	No alias	Pentatricopeptide repeat-containing protein At5g21222...	0.05	Archaeplastida
GSVIVT01015378001	No alias	Pentatricopeptide repeat-containing protein At5g21222...	0.04	LandPlants
Smo21211	No alias	Pentatricopeptide repeat-containing protein At5g21222...	0.04	LandPlants
Solyc07g032380.4.1	No alias	Pentatricopeptide repeat-containing protein At5g21222...	0.05	LandPlants
GSVIVT01015378001	No alias	Pentatricopeptide repeat-containing protein At5g21222...	0.04	SeedPlants
Solyc07g032380.4.1	No alias	Pentatricopeptide repeat-containing protein At5g21222...	0.05	SeedPlants

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	298	341
IPR002885	Pentatricopeptide_repeat	223	272
IPR002885	Pentatricopeptide_repeat	147	194
IPR002885	Pentatricopeptide_repeat	364	412
IPR002885	Pentatricopeptide_repeat	434	481

External Links

No external refs found!