LOC_Os01g12810.3


Description : Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana (sp|q8s9d1|pp395_arath : 476.0)


Gene families : OG_01_0009354 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009354_tree ,
OG_02_0007114 (LandPlants) Phylogenetic Tree(s): OG_02_0007114_tree ,
OG_03_0006861 (SeedPlants) Phylogenetic Tree(s): OG_03_0006861_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12810.3
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015378001 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.06 Archaeplastida
Smo21211 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 Archaeplastida
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.05 Archaeplastida
GSVIVT01015378001 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.04 LandPlants
Smo21211 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.04 LandPlants
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.05 LandPlants
GSVIVT01015378001 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.04 SeedPlants
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 298 341
IPR002885 Pentatricopeptide_repeat 223 272
IPR002885 Pentatricopeptide_repeat 147 194
IPR002885 Pentatricopeptide_repeat 364 412
IPR002885 Pentatricopeptide_repeat 434 481
No external refs found!