LOC_Os01g12730.1


Description : G-class RAB GTPase


Gene families : OG_01_0001137 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001137_tree ,
OG_02_0000971 (LandPlants) Phylogenetic Tree(s): OG_02_0000971_tree ,
OG_03_0000847 (SeedPlants) Phylogenetic Tree(s): OG_03_0000847_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12730.1
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00072050 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.04 Archaeplastida
AT1G22740 ATRABG3B,... RAB GTPase homolog G3B 0.02 Archaeplastida
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.03 Archaeplastida
Mp8g13820.1 No alias G-class RAB GTPase 0.07 Archaeplastida
Solyc01g109520.3.1 No alias G-class RAB GTPase 0.04 Archaeplastida
AMTR_s00059p00072050 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.04 LandPlants
AT1G22740 ATRABG3B,... RAB GTPase homolog G3B 0.02 LandPlants
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.03 LandPlants
GSVIVT01017061001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 LandPlants
Mp8g13820.1 No alias G-class RAB GTPase 0.07 LandPlants
Smo228214 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 LandPlants
Solyc01g109520.3.1 No alias G-class RAB GTPase 0.04 LandPlants
AMTR_s00059p00072050 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.04 SeedPlants
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.03 SeedPlants
AT3G18820 ATRAB7B, RAB7B,... RAB GTPase homolog G3F 0.02 SeedPlants
Solyc01g109520.3.1 No alias G-class RAB GTPase 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 176
No external refs found!