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  5. MA_20372g0020

MA_20372g0020 (EDF4, RAV1)


Aliases : EDF4, RAV1

Description : transcription factor (RAV/NGATHA)


Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_20372g0020

Target Alias Description ECC score Gene Family Method Actions
AT2G46870 NGA1 AP2/B3-like transcriptional factor family protein 0.02 OrthoFinder output from all 47 species
Aob_g11266 EDF4, RAV1 AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0102.g044523 EDF4, RAV1 AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
Cba_g10810 EDF4, RAV1 AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
Ceric.20G072500.1 EDF2, AtRAV2,... AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
Gb_18035 EDF4, RAV1 transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 OrthoFinder output from all 47 species
LOC_Os06g01860.1 LOC_Os06g01860 transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05740.1 LOC_Os11g05740 transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species
LOC_Os12g06080.1 LOC_Os12g06080 transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species
MA_865117g0010 EDF4, RAV1 transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 OrthoFinder output from all 47 species
MA_94318g0010 TEM1, EDF1 transcription factor (AP2-RAV) 0.04 OrthoFinder output from all 47 species
Pir_g49278 EDF4, RAV1 AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
Solyc08g013700.1.1 NGA3, Solyc08g013700 transcription factor (RAV/NGATHA) 0.03 OrthoFinder output from all 47 species
Zm00001e038099_P001 NGA3, Zm00001e038099 transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 162 263
No external refs found!