LOC_Os06g44890 (Os06g0659300)


Aliases : Os06g0659300

Description : 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin binding Arabidopsis thaliana VILLIN4 villin 4 (VLN4)


Gene families : OG_01_0000541 (Gene family) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g44890
Cluster HCCA cluster: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT2G41740 ATVLN2, VLN2 villin 2 0.03 Gene family
AT3G57410 ATVLN3, VLN3 villin 3 0.03 Gene family
AT4G30160 VLN4, ATVLN4 villin 4 0.02 Gene family
Cpa|evm.model.tig00001366.21 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.01 Gene family
Cre12.g524400 No alias No description available 0.01 Gene family
Cre12.g555550 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.01 Gene family
GSVIVT01029237001 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.05 Gene family
GSVIVT01033261001 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.04 Gene family
LOC_Os08g14230 Os08g0240800 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.03 Gene family
MA_10429481g0030 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.02 Gene family
MA_10430359g0020 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.01 Gene family
MA_10430359g0040 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.02 Gene family
Solyc04g015830.3.1 Solyc04g015830.3 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.02 Gene family
Zm00001d006533 GRMZM2G365250 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.05 Gene family
Zm00001d011854 GRMZM2G180988 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.02 Gene family
Zm00001d042084 GRMZM2G047310 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA InterProScan
BP GO:0007010 cytoskeleton organization IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 319 385
IPR007123 Gelsolin-like_dom 462 530
IPR007123 Gelsolin-like_dom 582 622
IPR007123 Gelsolin-like_dom 77 157
IPR007123 Gelsolin-like_dom 197 265
IPR007123 Gelsolin-like_dom 689 760
IPR003128 Villin_headpiece 981 1016
No external refs found!