1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_19520g0020

MA_19520g0020 (ICU4, ATHB15, ATHB-15, CNA)


Aliases : ICU4, ATHB15, ATHB-15, CNA

Description : transcription factor (HD-ZIP III)


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_19520g0020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00069240 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT1G52150 ICU4, ATHB15,... Homeobox-leucine zipper family protein / lipid-binding... 0.02 OrthoFinder output from all 47 species
AT5G32670 No alias No description available 0.02 OrthoFinder output from all 47 species
Als_g39406 PHB-1D, ATHB-14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26987 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06100 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14282.t1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046826 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g22008 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22860 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g28120 PHB-1D, ATHB-14,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G076100.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G020900.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G068400.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G045900.1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g47759 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12681 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017010001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01025193001 IFL1, IFL, REV RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01035612001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Gb_02083 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Gb_10259 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
LOC_Os03g43930.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Len_g10271 HB-8, ATHB8, ATHB-8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14702 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11640 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13163 PHB-1D, ATHB-14,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09911 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08284 No alias transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g066500.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Solyc11g069470.3.1 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e000073_P001 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e004553_P004 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Zm00001e005034_P001 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
Zm00001e012408_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e018118_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR013978 MEKHLA 679 821
IPR002913 START_lipid-bd_dom 144 352
IPR001356 Homeobox_dom 18 76
No external refs found!