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  5. LOC_Os01g11580.1

LOC_Os01g11580.1


Description : transcriptional co-activator (BET/GTE)


Gene families : OG_01_0000250 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000250_tree ,
OG_02_0000330 (LandPlants) Phylogenetic Tree(s): OG_02_0000330_tree ,
OG_03_0000655 (SeedPlants) Phylogenetic Tree(s): OG_03_0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g11580.1
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.1 Archaeplastida
AT3G27260 GTE8 global transcription factor group E8 0.03 Archaeplastida
AT5G10550 GTE2 global transcription factor group E2 0.03 Archaeplastida
Cre08.g367300 No alias Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os07g32420.1 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.03 Archaeplastida
Solyc07g062660.4.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Solyc09g090370.3.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Solyc10g008070.4.1 No alias Transcription factor GTE4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
AT1G06230 GTE4 global transcription factor group E4 0.09 LandPlants
AT3G01770 ATBET10, BET10 bromodomain and extraterminal domain protein 10 0.02 LandPlants
AT3G27260 GTE8 global transcription factor group E8 0.03 LandPlants
AT5G10550 GTE2 global transcription factor group E2 0.03 LandPlants
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.03 LandPlants
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.05 LandPlants
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
LOC_Os07g32420.1 No alias transcriptional co-activator (BET/GTE) 0.04 LandPlants
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.01 LandPlants
Pp3c12_15340V3.1 No alias DNA-binding bromodomain-containing protein 0.01 LandPlants
Solyc07g062660.4.1 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
Solyc10g008070.4.1 No alias Transcription factor GTE4 OS=Arabidopsis thaliana... 0.04 LandPlants
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.04 LandPlants
Zm00001e014297_P001 No alias transcriptional co-activator (BET/GTE) 0.02 LandPlants
AMTR_s00021p00136760 evm_27.TU.AmTr_v1... Transcription factor GTE4 OS=Arabidopsis thaliana 0.01 SeedPlants
AT1G06230 GTE4 global transcription factor group E4 0.07 SeedPlants
AT5G10550 GTE2 global transcription factor group E2 0.03 SeedPlants
AT5G46550 No alias DNA-binding bromodomain-containing protein 0.02 SeedPlants
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.03 SeedPlants
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.05 SeedPlants
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.02 SeedPlants
LOC_Os07g32420.1 No alias transcriptional co-activator (BET/GTE) 0.04 SeedPlants
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.03 SeedPlants
Solyc02g071510.3.1 No alias transcriptional co-activator (BET/GTE) 0.02 SeedPlants
Solyc07g062660.4.1 No alias transcriptional co-activator (BET/GTE) 0.03 SeedPlants
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.04 SeedPlants
Zm00001e014297_P001 No alias transcriptional co-activator (BET/GTE) 0.02 SeedPlants
Zm00001e024513_P001 No alias transcriptional co-activator (BET/GTE) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001487 Bromodomain 1 77
IPR027353 NET_dom 159 221
No external refs found!