MA_192398g0010

Description : transcription factor (mTERF)

Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_192398g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00117910	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00010p00224530	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00225250	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.05	OrthoFinder output from all 47 species
AMTR_s00010p00225430	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.05	OrthoFinder output from all 47 species
AMTR_s00010p00236880	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00239860	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00038p00175390	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00060p00059830	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00066p00157220	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00126p00036560	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s02857p00005060	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AT1G62110	No alias	Mitochondrial transcription termination factor family protein	0.02	OrthoFinder output from all 47 species
AT3G46950	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
AT5G23930	No alias	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
Aev_g02436	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g49279	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08791	EMB2219	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18494	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g26943	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g28360	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene09179.t1	Aspi01Gene09179	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g01911	EMB93, SOLDAT10	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g12846	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14738	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G017100.1	Ceric.20G017100	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.30G015700.1	Ceric.30G015700	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020965.50	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Dcu_g05343	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g09151	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g22736	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10365	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06040	EMB2219	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01017772001	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
GSVIVT01022213001	No alias	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
GSVIVT01028383001	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
GSVIVT01036787001	No alias	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
Gb_03684	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Gb_07257	PTAC15	TAC15 cofactor of plastid-encoded RNA polymerase....	0.03	OrthoFinder output from all 47 species
Gb_15878	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
LOC_Os05g33440.1	LOC_Os05g33440	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
LOC_Os05g33460.2	LOC_Os05g33460	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
LOC_Os05g34160.1	LOC_Os05g34160	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g12070.1	LOC_Os06g12070	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g12080.1	LOC_Os06g12080	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
LOC_Os07g24090.1	LOC_Os07g24090	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os11g14130.1	LOC_Os11g14130	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Len_g35819	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_493420g0010	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Sam_g00521	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g24410	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g24968	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Smo403419	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Solyc04g011700.2.1	Solyc04g011700	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Solyc04g051880.3.1	Solyc04g051880	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g072500.1.1	Solyc04g072500	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Solyc04g072530.2.1	Solyc04g072530	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Spa_g12187	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g17479	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g56015	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g19485	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31139	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e010589_P001	Zm00001e010589	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Zm00001e022322_P001	Zm00001e022322	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Zm00001e027097_P001	Zm00001e027097	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Zm00001e031638_P001	Zm00001e031638	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	180	267
IPR003690	MTERF	17	92
IPR003690	MTERF	96	168

External Links

No external refs found!

MA_192398g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation