1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_185116g0020

MA_185116g0020


Description : DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thaliana (sp|f4kfv7|suv3l_arath : 681.0)


Gene families : OG0002203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002203_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_185116g0020

Target Alias Description ECC score Gene Family Method Actions
Ceric.11G056800.1 Ceric.11G056800 not classified & original description: pacid=50596860... 0.03 OrthoFinder output from all 47 species
Dde_g12433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04994 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011395001 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.07 OrthoFinder output from all 47 species
Gb_39537 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53500.1 ATSUV3, EDA15,... ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza... 0.01 OrthoFinder output from all 47 species
LOC_Os04g38630.1 LOC_Os04g38630 ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza... 0.04 OrthoFinder output from all 47 species
Len_g09778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g01600.1 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.02 OrthoFinder output from all 47 species
Solyc11g011460.2.1 Solyc11g011460 DExH-box ATP-dependent RNA helicase DExH18,... 0.05 OrthoFinder output from all 47 species
Tin_g11872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007912_P001 Zm00001e007912 ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 366 472
No external refs found!