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MA_184421g0010 (FdC2)


Aliases : FdC2

Description : Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana (sp|o23344|fdc1_arath : 156.0)


Gene families : OG0007333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_184421g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G14890 FdC2 2Fe-2S ferredoxin-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g117987 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Ala_g05506 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Aop_g01954 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene20345.t1 FdC2, Aspi01Gene20345 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0074.g037536 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Cba_g09036 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Cre07.g334800 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g37722 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.09 OrthoFinder output from all 47 species
Ehy_g10832 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Gb_40918 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g45710.1 FdC2, LOC_Os03g45710 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g11679 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ore_g45396 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Pnu_g00441 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 90 162
No external refs found!