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  5. MA_18093g0010

MA_18093g0010 (ATPMEPCRA, PMEPCRA)


Aliases : ATPMEPCRA, PMEPCRA

Description : Pectinesterase 2.1 OS=Solanum lycopersicum (sp|p09607|pme21_sollc : 97.4)


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_18093g0010
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00101250 ATPMEPCRA,... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00105p00078750 PME44, ATPME44,... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00129p00033080 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00070300 PME1, ATPME1,... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 OrthoFinder output from all 47 species
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.04 OrthoFinder output from all 47 species
AT2G26440 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 OrthoFinder output from all 47 species
AT2G47550 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G10710 RHS12 root hair specific 12 0.03 OrthoFinder output from all 47 species
AT3G14300 PME26, ATPMEPCRC, ATPME26 pectinesterase family protein 0.02 OrthoFinder output from all 47 species
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.07 OrthoFinder output from all 47 species
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G59010 PME61 pectin methylesterase 61 0.03 OrthoFinder output from all 47 species
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 OrthoFinder output from all 47 species
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.03 OrthoFinder output from all 47 species
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G20860 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 OrthoFinder output from all 47 species
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.05 OrthoFinder output from all 47 species
AT5G64640 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
Adi_g009732 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g08266 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aev_g12203 PME1, ATPME1 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g20237 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g11030 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Als_g08288 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Als_g10486 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aob_g23889 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aop_g11322 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Aop_g61344 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g61345 ATPMEPCRB EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05823.t1 Aspi01Gene05823 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene07382.t1 Aspi01Gene07382 EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene07394.t1 Aspi01Gene07394 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene10954.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10964.t1 Aspi01Gene10964 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11209.t1 Aspi01Gene11209 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene39882.t1 Aspi01Gene39882 EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene45094.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene45157.t1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g043013 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0113.g045942 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0205.g057784 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Azfi_s1989.g108563 No alias pectin methylesterase & original description: CDS=1-588 0.03 OrthoFinder output from all 47 species
Ceric.01G014700.1 Ceric.01G014700 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G014900.1 Ceric.01G014900 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.19G055200.1 Ceric.19G055200 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.19G055900.1 Ceric.19G055900 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z117500.1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016500.1 Ceric.30G016500 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.30G016600.1 Ceric.30G016600 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.34G021900.1 Ceric.34G021900 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g44370 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01562 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11844 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Dcu_g12104 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g08691 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dde_g48560 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g01475 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08496 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g09868 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15129 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16152 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26672 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27713 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01016667001 PME1, ATPME1 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01027653001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01031667001 PME61 Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_01424 ATPME3, PME3 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_03174 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_10522 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_10523 ATPME3, PME3 pectin methylesterase 0.06 OrthoFinder output from all 47 species
Gb_18512 ATPME3, PME3 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Gb_21388 ATPMEPCRF, PMEPCRF pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_24214 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_24564 ATPME3, PME3 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_28387 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_38211 ATPMEPCRA, PMEPCRA pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g13320.1 LOC_Os01g13320 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g15039.1 LOC_Os01g15039 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g20980.1 ATPMEPCRB, LOC_Os01g20980 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g57854.1 ATPMEPCRA,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os01g65790.1 LOC_Os01g65790 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os02g18650.1 LOC_Os02g18650 pectin methylesterase 0.06 OrthoFinder output from all 47 species
LOC_Os02g54190.1 PME61, LOC_Os02g54190 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os05g29790.1 ATPMEPCRB, LOC_Os05g29790 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os06g09340.1 LOC_Os06g09340 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os07g47830.1 ATPME3, PME3,... pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os08g34900.1 LOC_Os08g34900 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Len_g45359 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
MA_10434624g0020 ATPME2, PME2 pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_133919g0010 ATPMEPCRB pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_158002g0020 ATPMEPCRF, PMEPCRF pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_2017g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_354248g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_648837g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_84680g0010 ATPME2, PME2 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.04 OrthoFinder output from all 47 species
MA_931259g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Nbi_g01365 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g26986 ATPMEPCRB pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26987 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g32251 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pir_g18600 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pnu_g29006 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pp3c8_3840V3.1 Pp3c8_3840 Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
Ppi_g07525 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000947 No alias not classified & original description: CDS=1-831 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018433 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021277 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021279 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Smo114014 ATPMEPCRF, PMEPCRF Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Smo266995 ATPME2, PME2 Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Solyc01g091050.4.1 Solyc01g091050 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Solyc01g099950.1.1 Solyc01g099950 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc02g014300.2.1 Solyc02g014300 pectin methylesterase 0.07 OrthoFinder output from all 47 species
Solyc02g080220.3.1 ATPMEPCRA,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc02g081990.3.1 Solyc02g081990 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc03g083840.3.1 Solyc03g083840 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc03g083870.4.1 Solyc03g083870 pectin methylesterase 0.07 OrthoFinder output from all 47 species
Solyc03g123620.4.1 PME1, ATPME1,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc07g017600.3.1 PME44, ATPME44,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc07g064190.3.1 ATPMEPCRA,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc09g075350.4.1 Solyc09g075350 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc11g005770.2.1 Solyc11g005770 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Tin_g02036 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acTing on ester bond & original... 0.02 OrthoFinder output from all 47 species
Tin_g15500 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acTing on ester bond & original... 0.04 OrthoFinder output from all 47 species
Tin_g28885 ATPME2, PME2 EC_3.1 hydrolase acTing on ester bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011069_P001 PME61, Zm00001e011069 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e017514_P001 ATPMEPCRB, Zm00001e017514 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Zm00001e017515_P001 ATPME2, PME2,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e019069_P001 Zm00001e019069 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e022184_P001 PME44, ATPME44,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e026790_P001 ATPMEPCRB, Zm00001e026790 pectin methylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 162 272
No external refs found!