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  5. LOC_Os01g09280.1

LOC_Os01g09280.1


Description : transcription factor (MYB-related)


Gene families : OG_01_0000067 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000067_tree ,
OG_02_0000426 (LandPlants) Phylogenetic Tree(s): OG_02_0000426_tree ,
OG_03_0000467 (SeedPlants) Phylogenetic Tree(s): OG_03_0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g09280.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00040070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G74840 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.05 Archaeplastida
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G47390 No alias myb-like transcription factor family protein 0.03 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.03 Archaeplastida
AT5G58900 No alias Homeodomain-like transcriptional regulator 0.05 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os02g47744.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os05g50340.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os05g50350.1 No alias transcription factor (MYB-related) 0.07 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_267974g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_488767g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_6326342g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc12g008800.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc12g089170.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e028729_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e031755_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
AT1G74840 No alias Homeodomain-like superfamily protein 0.02 LandPlants
Gb_38078 No alias transcription factor (MYB-related) 0.02 LandPlants
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.03 LandPlants
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.02 LandPlants
Solyc12g008800.3.1 No alias transcription factor (MYB-related) 0.02 LandPlants
Zm00001e002313_P001 No alias transcription factor (MYB-related) 0.02 LandPlants
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.04 LandPlants
Gb_38078 No alias transcription factor (MYB-related) 0.02 SeedPlants
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.03 SeedPlants
Zm00001e002313_P001 No alias transcription factor (MYB-related) 0.02 SeedPlants
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 109 153
No external refs found!