MA_179420g0010 (emb1354, CDC48C)

Aliases : emb1354, CDC48C

Description : Cell division control protein 48 homolog C OS=Arabidopsis thaliana (sp|q9ss94|cd48c_arath : 248.0)

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_179420g0010

Target	Alias	Description	ECC score	Gene Family Method
AT5G03340	No alias	ATPase, AAA-type, CDC48 protein	0.02	OrthoFinder output from all 47 species
Cre17.g700300	CDC48B	Cell division control protein 48 homolog B...	0.02	OrthoFinder output from all 47 species
Dcu_g04096	CIP111	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010343001	emb1354, CDC48C	Cell division control protein 48 homolog C...	0.03	OrthoFinder output from all 47 species
Ppi_g18794	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g078320.2.1	CIP111, Solyc10g078320	Calmodulin-interacting protein 111 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc10g084050.2.1	Solyc10g084050	platform ATPase (CDC48)	0.06	OrthoFinder output from all 47 species
Zm00001e038987_P001	Zm00001e038987	platform ATPase (CDC48)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	56	155
IPR041569	AAA_lid_3	178	221

External Links

No external refs found!