MA_178867g0010

Description : AAA-ATPase At4g25835 OS=Arabidopsis thaliana (sp|q8ry66|aatpd_arath : 365.0)

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_178867g0010
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
AT4G25835	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
Adi_g077316	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g08283	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g12070	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G070900.1	Ceric.19G070900	not classified & original description: pacid=50575977...	0.04	OrthoFinder output from all 47 species
Ceric.19G071000.1	Ceric.19G071000	not classified & original description: pacid=50575763...	0.03	OrthoFinder output from all 47 species
Dac_g46255	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16997	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os12g28590.1	AATP1, LOC_Os12g28590	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_56516g0010	No alias	AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Msp_g10792	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017709	No alias	not classified & original description: CDS=1-1293	0.03	OrthoFinder output from all 47 species
Smo413949	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Solyc03g082640.3.1	Solyc03g082640	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	21	118
IPR003959	ATPase_AAA_core	232	374

External Links

No external refs found!

MA_178867g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation