LOC_Os01g08160.1


Description : G2-like GARP transcription factor


Gene families : OG_01_0001192 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001192_tree ,
OG_02_0000884 (LandPlants) Phylogenetic Tree(s): OG_02_0000884_tree ,
OG_03_0000674 (SeedPlants) Phylogenetic Tree(s): OG_03_0000674_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g08160.1
Cluster HCCA: Cluster_358

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00127250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
AT1G13300 HRS1 myb-like transcription factor family protein 0.02 Archaeplastida
AT2G03500 No alias Homeodomain-like superfamily protein 0.1 Archaeplastida
AT3G25790 No alias myb-like transcription factor family protein 0.04 Archaeplastida
AT4G37180 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01003551001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01011942001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01015462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Gb_34639 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c15_4480V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Solyc12g006800.2.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e003080_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e016724_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
AMTR_s00122p00127250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 LandPlants
AT1G13300 HRS1 myb-like transcription factor family protein 0.02 LandPlants
AT2G03500 No alias Homeodomain-like superfamily protein 0.08 LandPlants
AT3G25790 No alias myb-like transcription factor family protein 0.04 LandPlants
GSVIVT01003551001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
GSVIVT01011942001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
GSVIVT01015462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 LandPlants
Gb_34639 No alias G2-like GARP transcription factor 0.03 LandPlants
Pp3c15_4480V3.1 No alias Homeodomain-like superfamily protein 0.02 LandPlants
Smo402040 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 LandPlants
Solyc12g006800.2.1 No alias G2-like GARP transcription factor 0.07 LandPlants
Zm00001e003080_P001 No alias G2-like GARP transcription factor 0.03 LandPlants
Zm00001e016724_P001 No alias G2-like GARP transcription factor 0.03 LandPlants
Zm00001e039361_P001 No alias G2-like GARP transcription factor 0.02 LandPlants
AMTR_s00122p00127250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 SeedPlants
AT2G03500 No alias Homeodomain-like superfamily protein 0.05 SeedPlants
AT3G25790 No alias myb-like transcription factor family protein 0.01 SeedPlants
GSVIVT01003551001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 SeedPlants
GSVIVT01015462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 SeedPlants
Gb_34639 No alias G2-like GARP transcription factor 0.03 SeedPlants
Solyc12g006800.2.1 No alias G2-like GARP transcription factor 0.05 SeedPlants
Zm00001e003080_P001 No alias G2-like GARP transcription factor 0.03 SeedPlants
Zm00001e016724_P001 No alias G2-like GARP transcription factor 0.03 SeedPlants
Zm00001e039361_P001 No alias G2-like GARP transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!