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  5. MA_175737g0010

MA_175737g0010 (PAT2)


Aliases : PAT2

Description : AP3-complex subunit beta-A OS=Arabidopsis thaliana (sp|q9m2t1|ap3ba_arath : 251.0)


Gene families : OG0006164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_175737g0010

Target Alias Description ECC score Gene Family Method Actions
Aob_g12108 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60945.t1 PAT2, Aspi01Gene60945 large subunit beta of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Ceric.28G061600.1 PAT2, Ceric.28G061600 large subunit beta of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Gb_19472 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g74180.1 PAT2, LOC_Os01g74180 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.04 OrthoFinder output from all 47 species
Mp6g07170.1 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR029390 AP3B_C 324 385
No external refs found!