LOC_Os06g40150 (Os06g0604000)


Aliases : Os06g0604000

Description : 17.5.2 hormone metabolism.ethylene.signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein ?//CONTAINS one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g40150
Cluster HCCA cluster: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.06 Gene family
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.03 Gene family
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.02 Gene family
AT2G40350 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.03 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.02 Gene family
AT4G23750 TMO3, CRF2 cytokinin response factor 2 0.01 Gene family
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G25190 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01017315001 No alias No description available 0.03 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.02 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01036228001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g32040 Os02g0520000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.04 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os04g46400 Os04g0549700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.03 Gene family
LOC_Os04g56150 Os04g0655700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.03 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os08g41030 Os08g0521600 No description available 0.04 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.03 Gene family
LOC_Os10g41130 Os10g0560700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_100577g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10431529g0010 No alias No description available 0.02 Gene family
MA_10431882g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_116185g0010 No alias No description available 0.03 Gene family
MA_15000g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_256188g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_30120g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_411387g0010 No alias No description available 0.01 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_54341g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
MA_67841g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_77420g0010 No alias No description available 0.02 Gene family
MA_81029g0010 No alias No description available 0.01 Gene family
MA_84578g0010 No alias No description available 0.02 Gene family
MA_9260020g0010 No alias No description available 0.02 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.03 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.02 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.03 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.02 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.02 Gene family
Solyc05g050790.2.1 Solyc05g050790.2 No description available 0.03 Gene family
Solyc05g052040.1.1 Solyc05g052040.1 No description available 0.02 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.05 Gene family
Solyc08g008305.1.1 Solyc08g008305.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.02 Gene family
Solyc08g082210.3.1 Solyc08g082210.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc11g045680.2.1 Solyc11g045680.2 No description available 0.02 Gene family
Solyc11g045690.2.1 Solyc11g045690.2 No description available 0.02 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.04 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.03 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.04 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d009622 GRMZM2G100982 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d015759 GRMZM2G085678 17.5.2 hormone metabolism.ethylene.signal transduction... 0.1 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d017480 GRMZM5G816314 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.02 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.04 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.04 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d036889 GRMZM2G106591 17.5.2 hormone metabolism.ethylene.signal transduction... 0.07 Gene family
Zm00001d037165 GRMZM2G084264 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.03 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.03 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.1 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d048297 GRMZM2G399098 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d052152 GRMZM2G011110 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 54
No external refs found!