MA_17423g0010

Description : component MED26 of MEDIATOR transcription co-activator complex

Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_17423g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00061970	evm_27.TU.AmTr_v1...	Probable mediator of RNA polymerase II transcription...	0.03	OrthoFinder output from all 47 species
Adi_g056472	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g113666	No alias	component *(MED26) of MEDIATOR transcription...	0.02	OrthoFinder output from all 47 species
Aop_g26262	No alias	component *(MED26) of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Ceric.31G055300.1	Ceric.31G055300	not classified & original description: pacid=50574382...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011548	No alias	not classified & original description: CDS=1-762	0.02	OrthoFinder output from all 47 species
Sam_g29122	No alias	component *(MED26) of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Zm00001e035696_P001	Zm00001e035696	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR017923	TFIIS_N	148	198

External Links

No external refs found!