MA_17319g0010 (PDR6, ATPDR6)

Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_17319g0010
Cluster	HCCA: Cluster_196

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00097650	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT2G37280	ATPDR5, PDR5	pleiotropic drug resistance 5	0.03	OrthoFinder output from all 47 species
Adi_g035578	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g055702	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g61298	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g11576	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g22353	ABCG40, PDR12,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g36836	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g37548	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g65335	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02115.t1	ATPDR7, PDR7,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g24379	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g27199	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g41199	PDR11, ATPDR11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cre17.g723500	ATPDR3, PDR3	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Dac_g25337	PDR6, ATPDR6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g49905	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g28400	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g30091	PDR6, ATPDR6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01016993001	ATPDR7, PDR7	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01016998001	PDR1, ATPDR1	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01017337001	ABCG40, PDR12,...	ABC transporter G family member 40 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01031314001	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01034745001	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01035715001	PDR4, ATPDR4	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
LOC_Os02g21340.1	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os09g16449.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os11g37700.1	PDR11, ATPDR11,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Len_g12160	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Len_g41745	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10430834g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_10437002g0020	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_949447g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Nbi_g05895	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g17304	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g28590	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g39006	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59241	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004775	PDR6, ATPDR6	subfamily ABCG transporter & original description: CDS=697-5283	0.02	OrthoFinder output from all 47 species
Solyc05g053610.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc05g055330.3.1	PDR6, ATPDR6,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Spa_g21976	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g45075	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e020667_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e039353_P001	PIS1, ABCG37,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e040575_P001	PDR6, ATPDR6,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	175	357
IPR013525	ABC_2_trans	512	723
IPR013581	PDR_assoc	728	792
IPR029481	ABC_trans_N	90	150
IPR003439	ABC_transporter-like_ATP-bd	893	942

External Links

No external refs found!

MA_17319g0010 (PDR6, ATPDR6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation