Cpa|evm.model.tig00020693.6


Description : 27.1.3.11 RNA.processing.3 end processing.Pfs2 Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal. FY


Gene families : OG_01_0006332 (Gene family) Phylogenetic Tree(s): OG0006332_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00020693.6
Cluster HCCA cluster: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT5G13480 FY Transducin/WD40 repeat-like superfamily protein 0.01 Gene family
Solyc08g067040.3.1 Solyc08g067040.3 27.1.3.11 RNA.processing.3 end processing.Pfs2 Encodes a... 0.02 Gene family
Zm00001d042091 GRMZM5G881296 27.1.3.11 RNA.processing.3 end processing.Pfs2 Encodes a... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 261 298
IPR001680 WD40_repeat 110 142
IPR001680 WD40_repeat 311 341
IPR001680 WD40_repeat 219 256
IPR001680 WD40_repeat 181 214
No external refs found!