LOC_Os01g07070.2


Description : Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana (sp|q94kd0|ta15b_arath : 155.0)


Gene families : OG_01_0005595 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005595_tree ,
OG_02_0004944 (LandPlants) Phylogenetic Tree(s): OG_02_0004944_tree ,
OG_03_0007789 (SeedPlants) Phylogenetic Tree(s): OG_03_0007789_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g07070.2
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00073330 evm_27.TU.AmTr_v1... Transcription initiation factor TFIID subunit 15b... 0.07 Archaeplastida
AT5G58470 TAF15b TBP-associated factor 15B 0.07 Archaeplastida
Gb_25472 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10427252g0010 No alias Transcription initiation factor TFIID subunit 15b... 0.04 Archaeplastida
Mp7g03900.1 No alias Transcription initiation factor TFIID subunit 15b... 0.04 Archaeplastida
Solyc06g082220.4.1 No alias Transcription initiation factor TFIID subunit 15b... 0.04 Archaeplastida
Zm00001e016824_P001 No alias Transcription initiation factor TFIID subunit 15b... 0.06 Archaeplastida
Zm00001e025837_P001 No alias Transcription initiation factor TFIID subunit 15b... 0.1 Archaeplastida
AMTR_s00153p00073330 evm_27.TU.AmTr_v1... Transcription initiation factor TFIID subunit 15b... 0.07 LandPlants
AT5G58470 TAF15b TBP-associated factor 15B 0.07 LandPlants
MA_10427252g0010 No alias Transcription initiation factor TFIID subunit 15b... 0.04 LandPlants
Mp7g03900.1 No alias Transcription initiation factor TFIID subunit 15b... 0.04 LandPlants
Pp3c12_3430V3.1 No alias TBP-associated factor 15B 0.03 LandPlants
Solyc06g082220.4.1 No alias Transcription initiation factor TFIID subunit 15b... 0.07 LandPlants
Zm00001e016824_P001 No alias Transcription initiation factor TFIID subunit 15b... 0.09 LandPlants
Zm00001e025837_P001 No alias Transcription initiation factor TFIID subunit 15b... 0.14 LandPlants
AMTR_s00153p00073330 evm_27.TU.AmTr_v1... Transcription initiation factor TFIID subunit 15b... 0.07 SeedPlants
AT5G58470 TAF15b TBP-associated factor 15B 0.05 SeedPlants
MA_10427252g0010 No alias Transcription initiation factor TFIID subunit 15b... 0.04 SeedPlants
Solyc06g082220.4.1 No alias Transcription initiation factor TFIID subunit 15b... 0.07 SeedPlants
Zm00001e016824_P001 No alias Transcription initiation factor TFIID subunit 15b... 0.09 SeedPlants
Zm00001e025837_P001 No alias Transcription initiation factor TFIID subunit 15b... 0.14 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 364 393
IPR001876 Znf_RanBP2 88 118
No external refs found!