Description : component NOT3/5 of mRNA deadenylation CCR4-NOT complex
Gene families : OG0003951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003951_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00093740 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G054000.1 | Ceric.09G054000 | component *(NOT3) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g13304 | No alias | component *(NOT3) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g01609 | No alias | component *(NOT3) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
Len_g47292 | No alias | component *(NOT3) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g02194 | No alias | component *(NOT3) of mRNA deadenylation CCR4-NOT complex... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g10519 | No alias | component *(NOT3) of mRNA deadenylation CCR4-NOT complex... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g13489 | No alias | component *(NOT3) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0040.g012446 | No alias | component *(NOT3) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012376_P003 | Zm00001e012376 | component NOT3/5 of mRNA deadenylation CCR4-NOT complex | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0016972 | thiol oxidase activity | IEP | HCCA |
CC | GO:0030014 | CCR4-NOT complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007282 | NOT2/3/5_C | 82 | 214 |
No external refs found! |