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  5. MA_16489g0010

MA_16489g0010


Description : transcription factor (bHLH)


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_16489g0010
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT2G28160 ATBHLH029,... FER-like regulator of iron uptake 0.03 OrthoFinder output from all 47 species
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G29930 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g018971 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019810 AMS bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106592 AMS bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47390 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33809 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11513 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15646 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18631 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35383.t1 AMS, Aspi01Gene35383 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007559 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-894 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009209 ATBHLH029,... bHLH-type transcription factor & original description: CDS=1-1536 0.03 OrthoFinder output from all 47 species
Cba_g27911 AMS bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G052100.1 Ceric.08G052100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G044500.1 Ceric.20G044500 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.20G044800.1 Ceric.20G044800 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.20G044900.1 Ceric.20G044900 not classified & original description: pacid=50566885... 0.03 OrthoFinder output from all 47 species
Ceric.38G035000.1 Ceric.38G035000 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10528 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14460 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42479 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10027 AMS bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10516 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38747 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07160 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13184 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15579 SCRM2, ICE2 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Gb_36380 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g46228 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429407g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_2643g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_387150g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g07921 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19168 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g31850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38450 ATBHLH029,... transcriptional regulator *(FIT) of iron homeostasis &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011393 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015480 No alias bHLH-type transcription factor & original description: CDS=1-1986 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017655 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g07324 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16653 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.05 OrthoFinder output from all 47 species
Spa_g02622 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19879 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29188 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g42438 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28838 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008393_P001 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species
Zm00001e040186_P002 Zm00001e040186 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 101 144
No external refs found!