LOC_Os06g35700 (Os06g0549900)


Aliases : Os06g0549900

Description : 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein


Gene families : OG_01_0000072 (Gene family) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g35700
Cluster HCCA cluster: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT1G26380 No alias FAD-binding Berberine family protein 0.05 Gene family
AT1G26400 No alias FAD-binding Berberine family protein 0.02 Gene family
AT1G26410 No alias FAD-binding Berberine family protein 0.03 Gene family
AT1G26420 No alias FAD-binding Berberine family protein 0.02 Gene family
AT1G30700 No alias FAD-binding Berberine family protein 0.03 Gene family
AT1G30720 No alias FAD-binding Berberine family protein 0.05 Gene family
AT2G34810 No alias FAD-binding Berberine family protein 0.02 Gene family
AT4G20830 No alias FAD-binding Berberine family protein 0.05 Gene family
AT4G20860 No alias FAD-binding Berberine family protein 0.02 Gene family
AT5G44380 No alias FAD-binding Berberine family protein 0.05 Gene family
GSVIVT01020745001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
GSVIVT01020746001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
GSVIVT01021720001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
GSVIVT01021723001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.06 Gene family
GSVIVT01021734001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
LOC_Os06g35560 Os06g0548200 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
LOC_Os08g06170 Os08g0158200 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_10144220g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
MA_10428737g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_10428737g0020 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
MA_10430302g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.01 Gene family
MA_132990g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
MA_162773g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_5468901g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_8516716g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Solyc02g022860.1.1 Solyc02g022860.1 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Solyc02g079440.2.1 Solyc02g079440.2 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
Solyc02g079460.2.1 Solyc02g079460.2 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Zm00001d016199 GRMZM2G429540 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
Zm00001d024541 GRMZM2G078906 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Zm00001d037005 GRMZM2G403076 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Zm00001d037008 GRMZM2G369803 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
Zm00001d046318 GRMZM2G080839 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
Zm00001d049169 GRMZM2G173105 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 82 217
IPR012951 BBE 462 522
No external refs found!