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  5. MA_152693g0010

MA_152693g0010 (SLY1)


Aliases : SLY1

Description : SLY-type gibberellin signal transducer. component F-box of SCF E3 ubiquitin ligase complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_152693g0010
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00114p00120290 evm_27.TU.AmTr_v1... Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G24210 SLY1 F-box family protein 0.02 OrthoFinder output from all 47 species
Ala_g01481 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Ehy_g13606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08963 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
Gb_22367 SLY2 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33820.1 LOC_Os04g33820 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g05660.1 LOC_Os11g05660 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g047680.3.1 SLY2, Solyc07g047680 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
Zm00001e022823_P002 SLY1, Zm00001e022823 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 32 70
No external refs found!