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  5. MA_15246g0010

MA_15246g0010 (BRH1)


Aliases : BRH1

Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_15246g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G49210 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G34000 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G18773 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G18930 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G38140 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G06490 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g03271 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aev_g06976 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08586 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g15556 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g03039 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene28289.t1 Aspi01Gene28289 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65865.t1 Aspi01Gene65865 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0091.g042816 No alias not classified & original description: CDS=1-813 0.03 OrthoFinder output from all 47 species
Ceric.17G012000.1 Ceric.17G012000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.25G065700.1 Ceric.25G065700 not classified & original description: pacid=50593844... 0.02 OrthoFinder output from all 47 species
Ceric.29G079100.1 Ceric.29G079100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g45788 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g09730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_40635 RHA2A RHA2 signal transducer of abscisic acid perception 0.04 OrthoFinder output from all 47 species
LOC_Os01g16120.1 RHA2A, LOC_Os01g16120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g20930.1 ATL3, LOC_Os01g20930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g49710.1 LOC_Os02g49710 IDF1 iron uptake IRT1-ubiquitin ligase 0.03 OrthoFinder output from all 47 species
LOC_Os03g05560.1 LOC_Os03g05560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os08g06090.1 RHA3B, LOC_Os08g06090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g28782 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g04431 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_223372g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_373963g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_711804g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_895676g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g31863 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g14314 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g14483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18088 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g32058 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g16933 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g17354 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Smo172324 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc02g082420.3.1 Solyc02g082420 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Solyc06g063110.3.1 Solyc06g063110 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc08g008080.1.1 BRH1, Solyc08g008080 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g076830.1.1 Solyc08g076830 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc09g089890.1.1 Solyc09g089890 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07577 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g20029 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g29342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05338 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g31919 BRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007208_P002 Zm00001e007208 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e032838_P001 Zm00001e032838 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 104 147
No external refs found!