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  5. MA_150928g0020

MA_150928g0020 (ATPMEPCRF, PMEPCRF)


Aliases : ATPMEPCRF, PMEPCRF

Description : pectin methylesterase


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_150928g0020
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.04 OrthoFinder output from all 47 species
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
GSVIVT01014999001 ATPME3, PME3 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Msp_g01650 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g44479 ATPMEPCRB EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011069_P001 PME61, Zm00001e011069 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e022184_P001 PME44, ATPME44,... pectin methylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 231 528
IPR006501 Pectinesterase_inhib_dom 66 187
No external refs found!