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  5. MA_14836g0010

MA_14836g0010 (TIR1)


Aliases : TIR1

Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_14836g0010

Target Alias Description ECC score Gene Family Method Actions
Als_g01173 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Als_g23126 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene01669.t1 AFB2, Aspi01Gene01669 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035344 AFB2 not classified & original description: CDS=10-1980 0.02 OrthoFinder output from all 47 species
LOC_Os11g31620.1 AFB2, LOC_Os11g31620 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Nbi_g04904 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Ore_g29827 TIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06925 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 66 112
IPR001611 Leu-rich_rpt 154 173
IPR041567 COI1_F-box 7 46
No external refs found!