LOC_Os06g33570 (Os06g0527100)


Aliases : Os06g0527100

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1 (CNGC1)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g33570
Cluster HCCA cluster: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT4G30360 ATCNGC17, CNGC17 cyclic nucleotide-gated channel 17 0.03 Gene family
GSVIVT01032309001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Smo89324 PACid_15408478 No description available 0.02 Gene family
Solyc07g006510.3.1 Solyc07g006510.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d013688 GRMZM2G077828 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d021388 GRMZM2G135651 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d037035 GRMZM2G129375,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d045075 GRMZM2G436583 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 76 393
No external refs found!