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  5. MA_1417572g0010

MA_1417572g0010 (RGA, RGA1)


Aliases : RGA, RGA1

Description : transcription factor (GRAS)


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_1417572g0010
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AT3G03450 RGL2 RGA-like 2 0.03 OrthoFinder output from all 47 species
Adi_g102296 RGA2, GAI transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02589 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08104.t1 SCR, SGR1,... GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68508.t1 RGA2, GAI,... transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036465 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-2091 0.03 OrthoFinder output from all 47 species
Ceric.37G058000.1 RGA2, GAI,... transcription factor *(DELLA) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09377 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011710001 RGA, RGA1 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Ore_g26688 RGA, RGA1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29234 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.02 OrthoFinder output from all 47 species
Spa_g20961 RGA, RGA1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005412_P001 RGA, RGA1, Zm00001e005412 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 2 104
No external refs found!