MA_141447g0010


Description : no hits & (original description: none)


Gene families : OG0000880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000880_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_141447g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00244720 evm_27.TU.AmTr_v1... RGG repeats nuclear RNA binding protein A (Fragment)... 0.05 OrthoFinder output from all 47 species
AMTR_s00056p00215280 evm_27.TU.AmTr_v1... RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species
AMTR_s00111p00140620 evm_27.TU.AmTr_v1... RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species
Adi_g117740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01753 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Cba_g15021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G019400.1 Ceric.01G019400 regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Ceric.19G044900.1 Ceric.19G044900 regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Ceric.30G035000.1 Ceric.30G035000 regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Dde_g01517 No alias regulatory protein *(RGG) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
LOC_Os01g41880.1 LOC_Os01g41880 RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species
Pir_g04627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06151 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Solyc01g090190.3.1 Solyc01g090190 RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g31252 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019084 Stm1-like_N 1 74
IPR006861 HABP4_PAIRBP1-bd 180 284
No external refs found!