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  5. MA_14069g0010

MA_14069g0010


Description : CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica (sp|q6z4u2|caf1m_orysj : 119.0)


Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: MA_14069g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00238460 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Aev_g10007 CAF2, ATCAF2 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.03 OrthoFinder output from all 47 species
Dcu_g14796 ATCAF1, CAF1 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.02 OrthoFinder output from all 47 species
GSVIVT01013781001 CAF2, ATCAF2 CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana 0.33 OrthoFinder output from all 47 species
MA_757065g0010 CAF2, ATCAF2 CRS2-associated factor 2, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Nbi_g08909 CAF2, ATCAF2 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.06 OrthoFinder output from all 47 species
Ore_g08767 CAF2, ATCAF2 component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s1065.g027930 ATCAF1, CAF1 not classified & original description: CDS=49-1527 0.01 OrthoFinder output from all 47 species
Sam_g26827 No alias component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.01 OrthoFinder output from all 47 species
Tin_g12704 ATCAF1, CAF1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 2 78
No external refs found!