MA_138894g0010 (PGP11)

Aliases : PGP11

Description : subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_138894g0010
Cluster	HCCA: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method
Adi_g014378	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056680	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g060981	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g080508	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Adi_g105939	PGP11	subfamily ABCB transporter & original description: none	0.08	OrthoFinder output from all 47 species
Aev_g39147	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g33230	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g29781	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0203.g057675	ABCB19,...	subfamily ABCB transporter & original description: CDS=1-3912	0.02	OrthoFinder output from all 47 species
Azfi_s0232.g059284	PGP13	subfamily ABCB transporter & original description: CDS=307-4314	0.02	OrthoFinder output from all 47 species
Dac_g23401	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g38854	PGP3, MDR3	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g03500	PGP6	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g31851	ABCB19,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os08g45030.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g12068	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g16090	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g16192	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Ore_g25953	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03284	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17653	PGP1, ABCB1, ATPGP1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g03287	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo176522	ATPGP4, PGP4, ABCB4, MDR4	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Zm00001e017444_P002	PGP21, Zm00001e017444	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e019933_P001	Zm00001e019933	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	977	1126
IPR003439	ABC_transporter-like_ATP-bd	284	431
IPR011527	ABC1_TM_dom	62	214
IPR011527	ABC1_TM_dom	637	907

External Links

No external refs found!

MA_138894g0010 (PGP11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation