MA_137800g0010

Description : component mtRPL7/L12 of large ribosomal subunit proteome

Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_137800g0010

Target	Alias	Description	ECC score	Gene Family Method
AT1G70190	No alias	Ribosomal protein L7/L12, oligomerisation;Ribosomal...	0.07	OrthoFinder output from all 47 species
AT3G06040	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.08	OrthoFinder output from all 47 species
AT4G36420	No alias	Ribosomal protein L12 family protein	0.09	OrthoFinder output from all 47 species
AT4G37660	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.12	OrthoFinder output from all 47 species
Als_g22832	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01020	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Aop_g03383	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0331.g065406	No alias	not classified & original description: CDS=1-612	0.05	OrthoFinder output from all 47 species
Cba_g11519	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.19G029000.1	Ceric.19G029000	not classified & original description: pacid=50576272...	0.03	OrthoFinder output from all 47 species
Ceric.34G065900.1	Ceric.34G065900	not classified & original description: pacid=50622739...	0.03	OrthoFinder output from all 47 species
Dac_g05009	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g00728	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02341	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g01856	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01007737001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Gb_16973	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Gb_26365	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
Gb_27679	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
LOC_Os02g10540.1	LOC_Os02g10540	component mtRPL7/L12 of large ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
Lfl_g03909	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g35843	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp1g23110.1	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Pir_g20259	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g18974	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g25875	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Solyc02g031970.1.1	Solyc02g031970	component mtRPL7/L12 of large ribosomal subunit proteome	0.07	OrthoFinder output from all 47 species
Solyc02g092300.1.1	Solyc02g092300	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Solyc09g010030.3.1	Solyc09g010030	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Spa_g15114	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e025012_P001	Zm00001e025012	component mtRPL7/L12 of large ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
Zm00001e026468_P001	Zm00001e026468	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Zm00001e032350_P001	Zm00001e032350	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Zm00001e035594_P001	Zm00001e035594	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008097	5S rRNA binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008932	Ribosomal_L7/L12_oligo	85	134
IPR013823	Ribosomal_L7/L12_C	150	215

External Links

No external refs found!

MA_137800g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation