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  5. MA_136671g0010

MA_136671g0010 (PAP(IV), nPAP)


Aliases : PAP(IV), nPAP

Description : poly(A) RNA polymerase


Gene families : OG0000731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000731_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: MA_136671g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00207970 PAPS1,... RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.01 OrthoFinder output from all 47 species
AT2G25850 PAPS2 poly(A) polymerase 2 0.04 OrthoFinder output from all 47 species
AT4G32850 PAP(IV), nPAP nuclear poly(a) polymerase 0.04 OrthoFinder output from all 47 species
Adi_g102293 PAPS2 poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18756 PAPS1 poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06963 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33647 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17818 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G023600.1 PAP(IV), nPAP,... poly(A) RNA polymerase & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g01604 PAPS1 poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008352001 PAPS1 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
GSVIVT01016969001 PAP(IV), nPAP RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Lfl_g10052 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g10140.1 PAPS1 poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020416 PAP(IV), nPAP poly(A) RNA polymerase & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Solyc08g066200.3.1 PAP(IV), nPAP,... poly(A) RNA polymerase 0.02 OrthoFinder output from all 47 species
Solyc12g099180.3.1 PAPS3, Solyc12g099180 poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Zm00001e005199_P002 PAPS1, Zm00001e005199 poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Zm00001e030659_P006 PAP(IV), nPAP,... poly(A) RNA polymerase 0.04 OrthoFinder output from all 47 species
Zm00001e037202_P005 PAP(IV), nPAP,... poly(A) RNA polymerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004652 polynucleotide adenylyltransferase activity IEA Interproscan
BP GO:0043631 RNA polyadenylation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007010 PolA_pol_RNA-bd_dom 263 321
IPR007012 PolA_pol_cen_dom 71 259
No external refs found!