LOC_Os06g30940 (Os06g0506100)


Aliases : Os06g0506100

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g30940
Cluster HCCA cluster: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
GSVIVT01015233001 No alias No description available 0.03 Gene family
GSVIVT01017365001 No alias No description available 0.02 Gene family
GSVIVT01023971001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01027504001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01032721001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01033190001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01033389001 No alias No description available 0.02 Gene family
MA_392600g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_653417g0010 No alias No description available 0.02 Gene family
MA_7691g0010 No alias No description available 0.02 Gene family
MA_82569g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo181046 PACid_15413150 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo83339 PACid_15413429 No description available 0.03 Gene family
Smo99756 PACid_15418911 No description available 0.03 Gene family
Solyc03g098420.3.1 Solyc03g098420.3 No description available 0.02 Gene family
Zm00001d005149 GRMZM2G138303 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d013136 GRMZM5G892151 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d020825 GRMZM5G851929 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d023447 No alias No description available 0.02 Gene family
Zm00001d028422 GRMZM2G019689 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d032185 GRMZM2G161368 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 318 365
IPR002885 Pentatricopeptide_repeat 522 569
IPR002885 Pentatricopeptide_repeat 381 432
IPR002885 Pentatricopeptide_repeat 219 248
IPR002885 Pentatricopeptide_repeat 495 518
IPR002885 Pentatricopeptide_repeat 118 147
IPR002885 Pentatricopeptide_repeat 90 115
IPR002885 Pentatricopeptide_repeat 191 217
No external refs found!