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  5. LOC_Os01g01340.1

LOC_Os01g01340.1


Description : LIR1 protein involved in ferredoxin-NADP oxidoreductase regulation


Gene families : OG_01_0009438 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009438_tree ,
OG_02_0010162 (LandPlants) Phylogenetic Tree(s): OG_02_0010162_tree ,
OG_03_0010849 (SeedPlants) Phylogenetic Tree(s): OG_03_0010849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01340.1
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00166750 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.linear electron... 0.05 Archaeplastida
AT3G26740 CCL CCR-like 0.05 Archaeplastida
GSVIVT01004944001 No alias Photosynthesis.photophosphorylation.linear electron... 0.03 Archaeplastida
Smo444139 No alias Photosynthesis.photophosphorylation.linear electron... 0.05 Archaeplastida
Solyc09g092110.4.1 No alias LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.02 Archaeplastida
Zm00001e017178_P001 No alias LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.1 Archaeplastida
AMTR_s00016p00166750 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.linear electron... 0.04 LandPlants
AT3G26740 CCL CCR-like 0.05 LandPlants
GSVIVT01004944001 No alias Photosynthesis.photophosphorylation.linear electron... 0.03 LandPlants
Smo444139 No alias Photosynthesis.photophosphorylation.linear electron... 0.05 LandPlants
Solyc09g092110.4.1 No alias LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.02 LandPlants
Zm00001e017178_P001 No alias LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.1 LandPlants
AMTR_s00016p00166750 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.linear electron... 0.02 SeedPlants
AT3G26740 CCL CCR-like 0.03 SeedPlants
GSVIVT01004944001 No alias Photosynthesis.photophosphorylation.linear electron... 0.02 SeedPlants
Solyc09g092110.4.1 No alias LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.02 SeedPlants
Zm00001e017178_P001 No alias LIR1 protein involved in ferredoxin-NADP oxidoreductase... 0.1 SeedPlants

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009856 Lir1 1 127
No external refs found!