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  5. MA_134592g0010

MA_134592g0010 (EXPA16, ATHEXP ALPHA...)


Aliases : EXPA16, ATHEXP ALPHA 1.7, ATEXP16, EXP16, ATEXPA16

Description : alpha-class expansin


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_134592g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264980 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00058870 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
AT4G28250 EXPB3, ATEXPB3,... expansin B3 0.03 OrthoFinder output from all 47 species
Adi_g008634 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010993 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17560 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21084 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g37023 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37610 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26350 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07935 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07936 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g35329 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36017 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g44449 ATEXPA10,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g58865 ATHEXP BETA 1.4,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.06G052200.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G052300.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.06G056900.1 EXPA2, ATHEXP... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.06G057000.1 EXPA2, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G060100.1 EXPB3, ATEXPB3,... not classified & original description: pacid=50620545... 0.02 OrthoFinder output from all 47 species
Ceric.15G012800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G039400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.17G039500.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G039600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042200.1 ATEXPA10,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g15610 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g00758 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02593 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20179 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43799 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13980 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46089 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48928 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029411001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Gb_01048 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_09118 No alias alpha-class expansin 0.05 OrthoFinder output from all 47 species
Gb_20678 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Len_g18380 ATEXPA11, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_166764g0010 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_40671g0010 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_4979g0010 EXPA8, ATHEXP... alpha-class expansin 0.05 OrthoFinder output from all 47 species
MA_78155g0010 EXPB1, ATEXPB1,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_792493g0010 ATEXPA10,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
MA_91602g0010 EXPA8, ATHEXP... Expansin-A2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Mp1g24230.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp3g03930.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp5g20420.1 EXPA16, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp8g18860.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g44170 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16629 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27815 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c21_1850V3.1 ATEXPA10,... expansin A1 0.02 OrthoFinder output from all 47 species
Ppi_g19759 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g30057 ATEXPA3, EXP3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g06188 No alias alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g47903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo409954 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo419575 EXPA16, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 OrthoFinder output from all 47 species
Smo90332 ATEXPA3, EXP3,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo91129 EXP15, ATEXPA15,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Solyc01g010890.4.1 EXP15, ATEXPA15,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc03g115890.3.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc04g081870.4.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc05g007830.3.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g076220.3.1 EXPA6, ATEXP6,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
Solyc10g008440.3.1 EXPB3, ATEXPB3,... beta-class expansin 0.04 OrthoFinder output from all 47 species
Spa_g25561 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38497 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g42063 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45520 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01700 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06848 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13994 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14286 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30407 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31784 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007438_P001 EXPB3, ATEXPB3,... beta-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e037877_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e037914_P002 ATHEXP BETA 1.4,... Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 487.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 64 151
IPR007117 Expansin_CBD 162 239
No external refs found!