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  5. MA_133755g0010

MA_133755g0010


Description : putative silicon efflux transporter (LSI2)


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_133755g0010
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Aop_g18611 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g05390.6 LOC_Os03g05390 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
Len_g30065 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Smo148775 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
Smo98013 No alias Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Zm00001e002282_P001 Zm00001e002282 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 24 445
No external refs found!