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Aliases : BOB1
Description : Protein BOBBER 1 OS=Arabidopsis thaliana (sp|q9lv09|bob1_arath : 235.0)
Gene families : OG0003087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003087_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00231540 | BOB1,... | Protein BOBBER 1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.36G008100.1 | BOB1, Ceric.36G008100 | not classified & original description: pacid=50568871... | 0.04 | OrthoFinder output from all 47 species | |
| Cre17.g711650 | BOB1 | Protein BOBBER 1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g23492 | BOB1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g12530.1 | BOB1, LOC_Os06g12530 | Protein BOBBER 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12422 | BOB1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g01089 | BOB1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g083390.4.1 | BOB1, Solyc03g083390 | Protein BOBBER 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030871_P001 | BOB1, Zm00001e030871 | Protein BOBBER 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| CC | GO:0032040 | small-subunit processome | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007052 | CS_dom | 162 | 237 |
| No external refs found! |